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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfAKEGG: ctc:CTC01387 6.8e-18 acyl-coA dehydrogenase K00248; COG: COG2025 Electron transfer flavoprotein, alpha subunit; Psort location: Cytoplasmic, score: 8.87. (327 aa)    
Predicted Functional Partners:
carD_2
COG: COG2086 Electron transfer flavoprotein, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 0.999
carD_1
COG: COG2086 Electron transfer flavoprotein, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 0.995
EDS06163.1
FAD binding domain protein; KEGG: plt:Plut_0570 1.6e-39 D-lactate dehydrogenase (cytochrome) K00102; COG: COG0277 FAD/FMN-containing dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.940
EtfB
COG: COG2086 Electron transfer flavoprotein, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 
 0.928
EDS06160.1
FAD binding domain protein; KEGG: eci:UTI89_C3136 9.0e-163 hypothetical protein K00803; COG: COG0277 FAD/FMN-containing dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.905
EDS06846.1
Hypothetical protein.
  
 
 0.805
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.595
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.586
Nox
Nitroreductase family protein; KEGG: afu:AF2267 2.3e-22 NAD(P)H-flavin oxidoreductase; COG: COG0778 Nitroreductase; Psort location: Cytoplasmic, score: 8.87.
     
 0.537
EDS08737.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: lwe:lwe0460 8.9e-195 NADH:flavin oxidoreductase K00359; COG: COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.521
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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