STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS07076.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (77 aa)    
Predicted Functional Partners:
EDS06295.1
Hypothetical protein.
  
     0.720
EDS07977.1
Hypothetical protein; KEGG: rno:309804 1.6e-08 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: KOG3544 Collagens (type IV and type XIII), and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
     0.665
EDS08743.1
Hypothetical protein; KEGG: efa:EF3127 0.0074 gmk-2; guanylate kinase K00942.
  
     0.652
EDS05759.1
Hypothetical protein.
  
     0.611
EDS07652.1
Hypothetical protein; KEGG: ctc:CTC00811 3.5e-07 fumarate reductase flavoprotein subunit precursor K00244; COG: COG3976 Uncharacterized protein conserved in bacteria.
  
     0.573
ftsL_1
COG: COG2919 Septum formation initiator.
  
     0.554
EDS05418.1
Hypothetical protein; COG: COG0727 Predicted Fe-S-cluster oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
  
     0.554
EDS07075.1
Hypothetical protein.
       0.548
EDS07659.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.547
EDS06439.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.546
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.