Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS07106.1COG: COG3238 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 9.99. (143 aa)    
Predicted Functional Partners:
EDS06525.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.654
EDS05759.1
Hypothetical protein.
  
     0.648
spoIIP
Stage II sporulation protein P; COG: NOG13213 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.646
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.639
YpeA
Acetyltransferase, GNAT family; KEGG: rba:RB7615 1.0e-10 putative acetyltransferase K00680; COG: COG0456 Acetyltransferases; Psort location: Cytoplasmic, score: 8.87.
  
    0.635
argD
Aminotransferase, acetylornithine/succinylornithine family; KEGG: cje:Cj0227 5.6e-106 argD; acetylornithine aminotransferase K00818; COG: COG4992 Ornithine/acetylornithine aminotransferase; Psort location: Cytoplasmic, score: 8.87; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
       0.633
argJ
Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
       0.628
comEA
COG: COG1555 DNA uptake protein and related DNA-binding proteins; Psort location: CytoplasmicMembrane, score: 9.49.
       0.619
cotS
Spore coat protein, CotS family; COG: NOG09979 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
    0.601
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate.
  
    0.601
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.