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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ulaFKEGG: san:gbs1851 4.0e-80 similar to L-ribulose-5-phosphate 4-epimerase K01786; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87. (232 aa)    
Predicted Functional Partners:
ulaE_1
KEGG: ecs:ECs5173 1.1e-47 putative hexulose-6-phosphate isomerase K03079; COG: COG3623 Putative L-xylulose-5-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 8.87.
 
  0.987
ulaE_2
KEGG: ecs:ECs5173 2.3e-54 putative hexulose-6-phosphate isomerase K03079; COG: COG3623 Putative L-xylulose-5-phosphate 3-epimerase; Psort location: Cytoplasmic, score: 8.87.
 
  0.964
mtnB
Putative L-ribulose-5-phosphate 4-epimerase; KEGG: pho:PH0191 1.6e-21 L-fuculose phosphate aldolase K01628; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87.
  
  
 
0.923
rpe
KEGG: cno:NT01CX_2237 3.6e-56 ribulose-phosphate 3-epimerase K01783; COG: COG0036 Pentose-5-phosphate-3-epimerase; Psort location: Cytoplasmic, score: 8.87.
    
 0.917
AraD
KEGG: bld:BLi02063 3.6e-79 putative L-ribulose-5-phosphate 4-epimerase; RBL00998 K03077; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
  
 
0.900
gfo
Oxidoreductase, NAD-binding domain protein; KEGG: hsa:27294 1.2e-41 DHDH; dihydrodiol dehydrogenase (dimeric) K00212; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
    0.746
lyx_1
Carbohydrate kinase, FGGY family protein; KEGG: yps:YPTB0797 3.4e-92 sgbK, lyx, lyxK, xylK; putative L-xylulose kinase K00880; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87; Belongs to the FGGY kinase family.
  
  
 0.725
araB
Carbohydrate kinase, FGGY family protein; KEGG: lsa:LSA1859 2.2e-159 araB; L-ribulokinase K00853; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.722
XylB_6
Carbohydrate kinase, FGGY family protein; KEGG: mta:Moth_2025 1.1e-36 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
 
 0.721
xylB
Xylulokinase; KEGG: mta:Moth_2025 4.1e-110 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.721
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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