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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06915.1Hypothetical protein; KEGG: ppr:PBPRA2674 0.0079 galU; putative UTP-glucose-1-phosphateuridylyltransferase, galU K00963. (88 aa)    
Predicted Functional Partners:
EDS05871.1
Hypothetical protein; COG: NOG13187 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.648
EDS05872.1
Hypothetical protein; COG: NOG21901 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.600
Smc_1
Hypothetical protein; KEGG: gga:374182 2.2e-09 ROCK2; Rho-associated, coiled-coil containing protein kinase 2 K04514; COG: COG4913 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
  
     0.596
EDS06914.1
Hypothetical protein; COG: NOG15344 non supervised orthologous group.
       0.568
EDS08013.1
Hypothetical protein; COG: COG3593 Predicted ATP-dependent endonuclease of the OLD family; Psort location: Cytoplasmic, score: 8.87.
  
     0.459
EDS08596.1
Hypothetical protein; COG: COG3291 FOG: PKD repeat; Psort location: Cytoplasmic, score: 8.87.
  
     0.456
zntR_2
Methyltransferase domain protein; KEGG: btk:BT9727_3407 3.2e-14 possible ubiquinone/menaquinone methyltransferase K00599; COG: COG0500 SAM-dependent methyltransferases; Psort location: Cytoplasmic, score: 8.87.
  
     0.439
EDS06913.1
Hypothetical protein; ORF located using Blastx.
       0.405
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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