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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmpBPutative 6-phospho 3-hexuloisomerase; KEGG: sau:SA0529 1.2e-27 hypothetical protein K08094; COG: COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Psort location: Cytoplasmic, score: 8.87. (189 aa)    
Predicted Functional Partners:
EDS06731.1
Hypothetical protein; KEGG: pab:PAB0967 1.7e-21 ADP-specific glucokinase K08074; COG: COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.924
pgi
KEGG: bcl:ABC2906 1.4e-164 pgi; glucose-6-phosphate isomerase K01810; COG: COG0166 Glucose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 9.98; Belongs to the GPI family.
    
 0.922
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.920
pfkA-2
Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
    
 0.916
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
    
 0.916
pfp_1
Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
    
 0.915
pfp_2
Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
    
 0.915
dxs_1
Transketolase, C-terminal domain protein; KEGG: lmo:lmo1033 1.8e-86 similar to transketolase K00615; COG: COG3958 Transketolase, C-terminal subunit.
     
  0.900
Tkt_1
Transketolase, thiamine diphosphate binding domain protein; KEGG: lmf:LMOf2365_1053 7.1e-83 transketolase, N-terminal subunit K00615; COG: COG3959 Transketolase, N-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
     
  0.900
fas2
Transketolase, thiamine diphosphate binding domain protein; KEGG: mta:Moth_0236 1.5e-48 transketolase-like K00615; COG: COG3959 Transketolase, N-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
     
  0.900
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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