Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dnaC_1Putative DNA replication protein DnaC; KEGG: spi:MGAS10750_Spy1680 6.7e-14 replicative DNA helicase K01529; COG: COG1484 DNA replication protein; Psort location: Cytoplasmic, score: 8.87. (337 aa)    
Predicted Functional Partners:
EDS06874.1
DnaD domain protein; COG: COG3935 Putative primosome component and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
    0.941
prs-2
KEGG: cpr:CPR_1519 1.4e-100 prs; ribose-phosphate pyrophosphokinase K00948; COG: COG0462 Phosphoribosylpyrophosphate synthetase; Psort location: Cytoplasmic, score: 8.87.
       0.792
EDS07093.1
Hypothetical protein; COG: NOG13733 non supervised orthologous group.
  
     0.738
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
     0.716
mftC_2
six-Cys-in-45 modification radical SAM protein; KEGG: syg:sync_2368 3.3e-07 arylsulfatase regulator; COG: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); Psort location: Cytoplasmic, score: 8.87.
  
     0.555
EDS05037.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 
 0.541
EDS08144.1
Hypothetical protein; KEGG: ctc:CTC00993 0.0038 V-type sodium ATP synthase subunit G K02121; COG: NOG13209 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.503
EDS05074.1
COG: COG0629 Single-stranded DNA-binding protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.499
murR
SIS domain protein; KEGG: bxe:Bxe_A3454 0.00072 glucokinase K00845; COG: COG1737 Transcriptional regulators; Psort location: Cytoplasmic, score: 8.87.
  
     0.483
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.436
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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