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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06908.1Hypothetical protein; COG: COG1418 Predicted HD superfamily hydrolase; Psort location: Cytoplasmic, score: 8.87. (177 aa)    
Predicted Functional Partners:
EDS04949.1
Hypothetical protein; KEGG: cal:orf19.3100 0.0042 USO4; coiled-coil protein necessary for protein transport from ER to Golgi K01553; COG: COG4905 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
     0.854
EDS08133.1
COG: COG4905 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.550
EDS06909.1
LysM domain protein; KEGG: lsl:LSL_0304 0.0019 phage lysin K01185; COG: NOG23722 non supervised orthologous group.
       0.517
tktA
Transketolase, thiamine diphosphate binding domain protein; KEGG: cpe:CPE0296 8.5e-87 tktN; transketolase N-terminal section K00615; COG: COG3959 Transketolase, N-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
       0.475
dxs_3
Transketolase, pyridine binding domain protein; KEGG: cno:NT01CX_1268 1.3e-97 transketolase, C-terminal subunit K00615; COG: COG3958 Transketolase, C-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
       0.475
fsa
Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
     
 0.431
cinA_2
Competence/damage-inducible domain protein CinA; KEGG: hsa:80308 5.5e-07 FLAD1; FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) K00953; COG: COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Psort location: Cytoplasmic, score: 8.87; Belongs to the CinA family.
 
    0.418
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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