Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
CwlC_2GBS Bsp-like repeat protein; COG: NOG18564 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (962 aa)    
Predicted Functional Partners:
EDS08620.1
Hypothetical protein.
 
     0.719
EDS08687.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.711
EDS05569.1
KEGG: bha:BH0810 2.2e-24 N-acetylmuramoyl-L-alanine amidase K01448; COG: NOG18564 non supervised orthologous group.
 
    
0.604
EDS08638.1
Hypothetical protein.
 
 
 0.543
EDS07882.1
Hypothetical protein; COG: NOG25267 non supervised orthologous group.
  
     0.533
EDS06510.1
Hypothetical protein; COG: NOG25267 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.498
EDS06821.1
Hypothetical protein; KEGG: bth:BT2881 1.1e-17 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991; COG: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase.
       0.480
rep
Hypothetical protein; KEGG: gbe:GbCGDNIH1_1179 1.3e-76 DNA helicase II K01529; COG: COG0210 Superfamily I DNA and RNA helicases; Psort location: Cytoplasmic, score: 8.87.
  
     0.480
EDS07631.1
Hypothetical protein.
  
     0.471
EDS06186.1
Hypothetical protein; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.454
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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