STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06783.1Hypothetical protein; COG: NOG23666 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (113 aa)    
Predicted Functional Partners:
flr_1
Flavin reductase-like protein; COG: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; Psort location: Cytoplasmic, score: 8.87.
 
     0.815
EDS06784.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.782
EDS06785.1
Hypothetical protein; COG: NOG35922 non supervised orthologous group.
 
     0.760
cat3
Putative chloramphenicol O-acetyltransferase; KEGG: cac:CAC0235 8.5e-16 chloramphenicol acetyltransferase K00638; COG: COG4845 Chloramphenicol O-acetyltransferase.
 
     0.465
EDS05618.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.438
EDS05726.1
Plasmid recombination enzyme; KEGG: pho:PH0134 1.1e-07 hypothetical protein K01079; COG: COG5022 Myosin heavy chain; Psort location: Cytoplasmic, score: 8.87.
  
     0.432
EDS06787.1
Hypothetical protein.
       0.410
EDS06788.1
Hypothetical protein.
       0.405
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.