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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06810.1Glycosyl hydrolase family 65 central catalytic domain protein; KEGG: ava:Ava_3752 1.9e-98 HAD-superfamily hydrolase subfamily IA, variant 3 K01838; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score: 8.87. (758 aa)    
Predicted Functional Partners:
EDS06809.1
Hypothetical protein; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
      0.790
EDS06813.1
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 2.1e-05 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; COG: COG1653 ABC-type sugar transport system, periplasmic component; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.634
YteT_2
Oxidoreductase, NAD-binding domain protein; KEGG: mba:Mbar_A1138 1.2e-11 myo-inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
  
    0.586
EDS06811.1
Hypothetical protein; COG: NOG30389 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.580
ypdA_3
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE2344 7.8e-45 lytS2; predicted ATPase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score: 8.87.
       0.580
ycjU
HAD hydrolase, family IA, variant 3; KEGG: vfi:VFA0937 4.8e-29 phosphoglycolate phosphatase K01091; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.572
EDS06335.1
HAD hydrolase, family IA, variant 3; KEGG: mba:Mbar_A0742 3.3e-21 beta-phosphoglucomutase K01838; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.572
tvaI
Alpha amylase, catalytic domain protein; KEGG: vvu:VV1_2227 5.2e-80 glycosidases K01187; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score: 9.98; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.571
EDS05329.1
HAD hydrolase, family IA, variant 3; KEGG: vfi:VFA0937 1.2e-30 phosphoglycolate phosphatase K01091; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.537
EDS07346.1
Alpha amylase, catalytic domain protein; KEGG: fal:FRAAL2309 4.4e-58 cyclomaltodextrinase K01208; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.526
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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