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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucIArabinose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (628 aa)    
Predicted Functional Partners:
scrK
Kinase, PfkB family; KEGG: ath:At1g06030 1.4e-63 T21E18.8; pfkB-type carbohydrate kinase family protein K00847; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98.
    
  0.802
fucU
RbsD/FucU transport family protein; COG: COG4154 Fucose dissimilation pathway protein FucU; Psort location: Cytoplasmic, score: 8.87; Belongs to the RbsD / FucU family.
 
   
 0.769
EDS06813.1
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 2.1e-05 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; COG: COG1653 ABC-type sugar transport system, periplasmic component; Psort location: Cytoplasmic, score: 8.87.
 
    0.733
btr_1
Transcriptional regulator, AraC family; KEGG: bce:BC3740 3.8e-14 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
 
     0.730
rhaB-2
Rhamnulokinase; KEGG: bha:BH1551 5.4e-133 rhamnulokinase K00848; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.726
ypdA_3
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE2344 7.8e-45 lytS2; predicted ATPase K07718; COG: COG2972 Predicted signal transduction protein with a C-terminal ATPase domain; Psort location: Cytoplasmic, score: 8.87.
 
     0.713
rhaB
Rhamnulokinase; KEGG: oih:OB0495 6.0e-118 rhamnulokinase K00848; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.712
EDS06811.1
Hypothetical protein; COG: NOG30389 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.671
YteT_2
Oxidoreductase, NAD-binding domain protein; KEGG: mba:Mbar_A1138 1.2e-11 myo-inositol 2-dehydrogenase K00010; COG: COG0673 Predicted dehydrogenases and related proteins; Psort location: Cytoplasmic, score: 8.87.
       0.671
EDS06804.1
Alpha-L-fucosidase; KEGG: cpe:CPE0324 6.4e-137 probable glycosyl hydrolase K01206; COG: COG3669 Alpha-L-fucosidase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.524
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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