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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06739.1Hypothetical protein; COG: COG1512 Beta-propeller domains of methanol dehydrogenase type. (308 aa)    
Predicted Functional Partners:
EDS06738.1
Hypothetical protein; COG: NOG06495 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.983
EDS06740.1
Hypothetical protein; COG: COG4260 Putative virion core protein (lumpy skin disease virus).
 
  
 0.972
petC1
FAD dependent oxidoreductase; KEGG: mma:MM1656 6.2e-84 oxidoreductase K00100; COG: COG0665 Glycine/D-amino acid oxidases (deaminating); Psort location: Cytoplasmic, score: 8.87.
  
   0.841
EDS06181.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.607
EDS06741.1
Putative cyclase; COG: COG1878 Predicted metal-dependent hydrolase; Psort location: Cytoplasmic, score: 8.87.
       0.532
sodC
KEGG: cno:NT01CX_1771 1.4e-29 superoxide dismutase K00518; COG: COG2032 Cu/Zn superoxide dismutase; Psort location: Cytoplasmic, score: 8.87.
    
   0.517
EDS06306.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.514
EDS07503.1
Tetratricopeptide repeat protein.
  
     0.512
FixL
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tma:TM1359 1.6e-21 sensor histidine kinase K02486; COG: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.479
EDS05708.1
CRISPR-associated RAMP protein; COG: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); Psort location: Cytoplasmic, score: 8.87.
  
     0.472
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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