Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ytlRLipid kinase, YegS/Rv2252/BmrU family; KEGG: eci:UTI89_C2362 8.2e-09 hypothetical protein; COG: COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; Psort location: Cytoplasmic, score: 8.87. (307 aa)    
Predicted Functional Partners:
EDS06540.1
KEGG: cpf:CPF_2131 6.9e-14 glycerophosphoryl diester phosphodiesterase family protein K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.720
mtrR_1
Transcriptional regulator, TetR family; KEGG: bha:BH3415 0.0026 NADH dehydrogenase K03885; COG: NOG38850 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.671
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.668
EDS06541.1
Hypothetical protein; KEGG: nph:NP2984A 0.0052 homolog 2 to phosphatidylglycerophosphatase K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.520
EDS06542.1
Hemerythrin HHE cation binding domain protein; KEGG: mmu:66576 0.0062 Uqcrh; ubiquinol-cytochrome c reductase hinge protein K00416; COG: COG2703 Hemerythrin; Psort location: Cytoplasmic, score: 8.87.
       0.437
rpsA_1
Tex-like protein N-terminal domain protein; KEGG: bur:Bcep18194_A5099 9.4e-168 RNA binding S1; COG: COG2183 Transcriptional accessory protein; Psort location: Cytoplasmic, score: 8.87.
  
    0.432
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.