Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS06542.1Hemerythrin HHE cation binding domain protein; KEGG: mmu:66576 0.0062 Uqcrh; ubiquinol-cytochrome c reductase hinge protein K00416; COG: COG2703 Hemerythrin; Psort location: Cytoplasmic, score: 8.87. (140 aa)    
Predicted Functional Partners:
EDS06541.1
Hypothetical protein; KEGG: nph:NP2984A 0.0052 homolog 2 to phosphatidylglycerophosphatase K01094; COG: COG0671 Membrane-associated phospholipid phosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
       0.686
EDS07914.1
Flavodoxin; KEGG: rsp:RSP_3191 2.2e-09 fprA; flavodoxin; COG: COG0716 Flavodoxins.
  
  
 0.584
EDS05456.1
Hypothetical protein; COG: COG0716 Flavodoxins; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.584
fprA1
Metallo-beta-lactamase domain protein; KEGG: eci:UTI89_C3072 1.2e-46 norV; anaerobic nitric oxide reductase flavorubredoxin; COG: COG0426 Uncharacterized flavoproteins; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.584
EDS07120.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
  
     0.474
EDS06540.1
KEGG: cpf:CPF_2131 6.9e-14 glycerophosphoryl diester phosphodiesterase family protein K01126; COG: COG0584 Glycerophosphoryl diester phosphodiesterase; Psort location: Cytoplasmic, score: 8.87.
       0.471
EDS08058.1
Hypothetical protein; COG: NOG34170 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.465
ytlR
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: eci:UTI89_C2362 8.2e-09 hypothetical protein; COG: COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; Psort location: Cytoplasmic, score: 8.87.
       0.437
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.