Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS06662.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (341 aa)    
Predicted Functional Partners:
EDS07980.1
Hypothetical protein; KEGG: ddi:DDB0167703 1.5e-05 hypothetical protein K01971; COG: KOG1181 FOG: Low-complexity; Psort location: Cytoplasmic, score: 8.87.
  
     0.649
FtsL_2
Hypothetical protein.
  
     0.595
EDS04907.1
Hypothetical protein; COG: COG3595 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.549
sgcG
Flavin reductase; KEGG: bcz:BCZK3002 5.2e-05 NAD(P)H dehydrogenase, quinone family K00355; COG: COG0655 Multimeric flavodoxin WrbA; Psort location: Cytoplasmic, score: 8.87.
 
     0.529
EDS06301.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.505
EDS04898.1
KEGG: cyb:CYB_1515 0.00089 tetratricopeptide repeat/protein kinase domain protein K08884; COG: COG0457 FOG: TPR repeat.
  
     0.487
EDS08291.1
Tetratricopeptide repeat protein; KEGG: mth:MTH977 0.00053 endo-1,4-beta-glucanase related protein K01179; COG: COG3291 FOG: PKD repeat; Psort location: Cytoplasmic, score: 8.87.
  
     0.485
EDS05872.1
Hypothetical protein; COG: NOG21901 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.478
EDS07540.1
Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
  
     0.471
EDS08473.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.465
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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