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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galMAldose 1-epimerase; KEGG: ldb:Ldb1268 5.2e-48 putative mutarotase K01785; COG: COG2017 Galactose mutarotase and related enzymes; Psort location: Cytoplasmic, score: 8.87. (290 aa)    
Predicted Functional Partners:
EDS06728.1
Hypothetical protein; COG: COG3822 ABC-type sugar transport system, auxiliary component.
 
     0.783
EDS06726.1
Hypothetical protein; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 8.87.
       0.776
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.744
FbaA
Ketose-bisphosphate aldolase; KEGG: lmf:LMOf2365_2167 2.8e-79 fructose-bisphosphate aldolase, class II family K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase.
     
 0.609
YbbH_1
Transcriptional regulator, RpiR family; KEGG: bam:Bamb_0825 3.2e-17 glucokinase K00845; COG: COG1737 Transcriptional regulators.
       0.606
fba
KEGG: cpf:CPF_1557 5.7e-113 fba; fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
     
 0.576
galT
UTP--hexose-1-phosphate uridylyltransferase; KEGG: cac:CAC2961 1.4e-150 galT; galactose-1-phosphate uridyltransferase K00964; COG: COG4468 Galactose-1-phosphate uridyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.503
fba_2
Ketose-bisphosphate aldolase; KEGG: mta:Moth_2404 5.7e-58 fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
     
 0.474
EDS06731.1
Hypothetical protein; KEGG: pab:PAB0967 1.7e-21 ADP-specific glucokinase K08074; COG: COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase; Psort location: Cytoplasmic, score: 8.87.
       0.463
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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