STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06481.1GtrA-like protein; KEGG: azo:azo2380 4.6e-07 glycosyltransferase K00754; COG: NOG22136 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (120 aa)    
Predicted Functional Partners:
epsJ_1
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 2.1e-47 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.630
hyaD
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_2152 7.5e-56 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.625
epsJ_2
Glycosyltransferase, group 2 family protein; KEGG: rco:RC0461 1.9e-06 putative two-domain glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.529
EDS04877.1
COG: COG4485 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.526
EDS08137.1
Hypothetical protein; COG: NOG30148 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.482
kfoC
KEGG: mxa:MXAN_4621 2.9e-45 glycosyl transferase family protein K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.473
EDS06480.1
Polysaccharide biosynthesis protein; COG: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.453
EDS07006.1
F5/8 type C domain protein; KEGG: cpe:CPE1364 5.7e-08 beta-N-acetylhexosaminidase K01207; COG: NOG36584 non supervised orthologous group.
  
  
 0.444
kpsM
ABC-2 type transporter; COG: COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.441
asd
KEGG: lsl:LSL_0313 7.3e-145 asd; aspartate-semialdehyde dehydrogenase K00133; COG: COG0136 Aspartate-semialdehyde dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
  
     0.436
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.