Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
XylB_6Carbohydrate kinase, FGGY family protein; KEGG: mta:Moth_2025 1.1e-36 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases. (273 aa)    
Predicted Functional Partners:
XylB_7
KEGG: tma:TM0284 3.5e-42 sugar kinase, FGGY family K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
     0.970
rpe
KEGG: cno:NT01CX_2237 3.6e-56 ribulose-phosphate 3-epimerase K01783; COG: COG0036 Pentose-5-phosphate-3-epimerase; Psort location: Cytoplasmic, score: 8.87.
    
 0.919
AraD
KEGG: bld:BLi02063 3.6e-79 putative L-ribulose-5-phosphate 4-epimerase; RBL00998 K03077; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
 
 0.918
ulaF
KEGG: san:gbs1851 4.0e-80 similar to L-ribulose-5-phosphate 4-epimerase K01786; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.918
EDS06728.1
Hypothetical protein; COG: COG3822 ABC-type sugar transport system, auxiliary component.
    
  0.902
EDS06335.1
HAD hydrolase, family IA, variant 3; KEGG: mba:Mbar_A0742 3.3e-21 beta-phosphoglucomutase K01838; COG: COG0637 Predicted phosphatase/phosphohexomutase; Psort location: Cytoplasmic, score: 8.87.
       0.775
glpK_2
Putative glycerol kinase; KEGG: chy:CHY_1839 4.9e-123 glpK; glycerol kinase K00864; COG: COG0554 Glycerol kinase; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.736
yoaC
KEGG: bca:BCE_3017 3.3e-22 sugar kinase, FGGY family, putative K00851; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
     0.726
RpiB_3
Sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: sth:STH2337 2.7e-26 ribose 5-phosphate isomerase K01808; COG: COG0698 Ribose 5-phosphate isomerase RpiB.
     
 0.509
rpiB_2
Sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: rru:Rru_A1334 9.7e-31 ribose 5-phosphate isomerase B K01819; COG: COG0698 Ribose 5-phosphate isomerase RpiB.
     
 0.418
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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