STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06363.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (205 aa)    
Predicted Functional Partners:
EDS06364.1
Hypothetical protein; COG: COG2407 L-fucose isomerase and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.926
xylB
Xylulokinase; KEGG: mta:Moth_2025 4.1e-110 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.732
adaA_1
Transcriptional regulator, AraC family; KEGG: bsu:BG10166 5.2e-13 adaA; methylphosphotriester-DNA alkyltransferase / transcriptional regulator (AraC family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
 
     0.548
EDS06360.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.494
EDS07845.1
Hypothetical protein; KEGG: rha:RHA1_ro04091 1.1e-06 L-arabinose isomerase K01804; COG: COG2407 L-fucose isomerase and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.478
YdjH_2
Kinase, PfkB family; KEGG: eci:UTI89_C1968 1.5e-66 ydjH; hypothetical sugar kinase YdjH K00874; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98; Belongs to the carbohydrate kinase PfkB family.
       0.466
rhaB-2
Rhamnulokinase; KEGG: bha:BH1551 5.4e-133 rhamnulokinase K00848; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
    0.442
rhaB
Rhamnulokinase; KEGG: oih:OB0495 6.0e-118 rhamnulokinase K00848; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
 
    0.436
ytrB_1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL3623 1.3e-26 putative ABC transporter (partial match); COG: COG1131 ABC-type multidrug transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.428
xylB_8
Carbohydrate kinase, FGGY family protein; KEGG: cac:CAC2612 1.8e-63 xylB; xylulose kinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87; Belongs to the FGGY kinase family.
  
  
 0.411
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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