STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase; KEGG: mta:Moth_2025 4.1e-110 xylulokinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87. (485 aa)    
Predicted Functional Partners:
rpe
KEGG: cno:NT01CX_2237 3.6e-56 ribulose-phosphate 3-epimerase K01783; COG: COG0036 Pentose-5-phosphate-3-epimerase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.920
EDS06728.1
Hypothetical protein; COG: COG3822 ABC-type sugar transport system, auxiliary component.
 
  
  0.915
EDS06364.1
Hypothetical protein; COG: COG2407 L-fucose isomerase and related proteins; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.785
EDS06363.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.732
AraD
KEGG: bld:BLi02063 3.6e-79 putative L-ribulose-5-phosphate 4-epimerase; RBL00998 K03077; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
  
 
 0.721
ulaF
KEGG: san:gbs1851 4.0e-80 similar to L-ribulose-5-phosphate 4-epimerase K01786; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.721
mtnB
Putative L-ribulose-5-phosphate 4-epimerase; KEGG: pho:PH0191 1.6e-21 L-fuculose phosphate aldolase K01628; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.720
EDS04963.1
RDD family protein; COG: COG1714 Predicted membrane protein/domain; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.491
YdjH_2
Kinase, PfkB family; KEGG: eci:UTI89_C1968 1.5e-66 ydjH; hypothetical sugar kinase YdjH K00874; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.423
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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