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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06385.1Hypothetical protein; COG: NOG07673 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (298 aa)    
Predicted Functional Partners:
petC1
FAD dependent oxidoreductase; KEGG: mma:MM1656 6.2e-84 oxidoreductase K00100; COG: COG0665 Glycine/D-amino acid oxidases (deaminating); Psort location: Cytoplasmic, score: 8.87.
 
     0.882
EDS05309.1
Hypothetical protein; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 8.87.
  
     0.587
EDS05482.1
Hypothetical protein; COG: NOG17819 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.555
EDS07133.1
Hypothetical protein; COG: NOG29223 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.536
EDS06660.1
Hypothetical protein; COG: NOG13729 non supervised orthologous group.
  
     0.517
EDS06382.1
NAD dependent epimerase/dehydratase family protein; KEGG: deh:cbdb_A1667 3.4e-51 putative dihydroflavonol 4-reductase K00091; COG: COG0451 Nucleoside-diphosphate-sugar epimerases; Psort location: Cytoplasmic, score: 8.87.
 
     0.509
EDS05267.1
Pyridoxamine 5'-phosphate oxidase family protein; COG: COG3871 Uncharacterized stress protein (general stress protein 26).
  
     0.496
EDS05993.1
Alcohol acetyltransferase; COG: NOG32388 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.63.
  
     0.467
EDS05426.1
Hypothetical protein.
  
     0.456
srpR_2
Transcriptional regulator, TetR family; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
  
     0.437
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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