Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS06392.1Hypothetical protein; KEGG: spn:SP_0187 2.1e-07 peptidase M24 family protein K01262; COG: COG0006 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 8.87. (360 aa)    
Predicted Functional Partners:
EDS06391.1
GroES-like protein; KEGG: eci:UTI89_C2864 1.1e-84 gutB; sorbitol dehydrogenase K00008; COG: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Psort location: Cytoplasmic, score: 9.98.
 
     0.816
araC_2
KEGG: bcz:BCZK3497 2.2e-10 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.596
nagC
ROK family protein; KEGG: chy:CHY_0270 6.1e-22 glcK; glucokinase K00845; COG: COG1940 Transcriptional regulator/sugar kinase; Psort location: Cytoplasmic, score: 9.98.
       0.524
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
     
 0.499
pheA
KEGG: mgm:Mmc1_1881 1.4e-45 prephenate dehydratase K01713; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score: 9.98.
    
 0.485
EDS07710.1
Hypothetical protein; KEGG: tfu:Tfu_0134 0.0010 inorganic H+ pyrophosphatase K01507; COG: COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.463
EDS05838.1
Amidohydrolase family protein; COG: COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold; Psort location: Cytoplasmic, score: 8.87.
  
    0.442
hemE_3
Hypothetical protein; KEGG: mmp:MMP0831 4.3e-16 mtbA; uroporphyrinogen decarboxylase (URO-D) K00599; COG: COG0407 Uroporphyrinogen-III decarboxylase; Psort location: Cytoplasmic, score: 8.87.
 
     0.427
EDS06557.1
ADP-ribosylglycohydrolase; KEGG: lmo:lmo2786 4.3e-28 bvrC; hypothetical protein K05521; COG: COG1397 ADP-ribosylglycohydrolase; Psort location: Cytoplasmic, score: 8.87.
  
    0.426
BacC
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: hma:pNG7030 2.4e-66 fabG3; 3-oxoacyl-[acyl-carrier protein] reductase K00059; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98.
 
 
   0.423
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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