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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucA_1Putative L-ribulose-5-phosphate 4-epimerase; KEGG: cpf:CPF_1051 7.0e-60 fucA; L-fuculose phosphate aldolase K01628; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; Psort location: Cytoplasmic, score: 8.87. (224 aa)    
Predicted Functional Partners:
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.910
glpR_1
Transcriptional regulator, DeoR family; COG: COG1349 Transcriptional regulators of sugar metabolism; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.671
fba
KEGG: cpf:CPF_1557 5.7e-113 fba; fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.670
FbaA
Ketose-bisphosphate aldolase; KEGG: lmf:LMOf2365_2167 2.8e-79 fructose-bisphosphate aldolase, class II family K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase.
  
 
 0.670
fba_2
Ketose-bisphosphate aldolase; KEGG: mta:Moth_2404 5.7e-58 fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.670
gatY
Ketose-bisphosphate aldolase; KEGG: chy:CHY_0128 3.9e-43 fba; fructose-1,6-bisphosphate aldolase, class II K01624; COG: COG0191 Fructose/tagatose bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.670
lsrF
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase; KEGG: mja:MJ0400 5.5e-44 putative aldolase K01726; COG: COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; Psort location: Cytoplasmic, score: 8.87.
    
 0.660
Fda_2
Putative fructose-1,6-bisphosphate aldolase; KEGG: tde:TDE0340 4.5e-49 fructose-bisphosphate aldolase, class-I K01623; COG: COG3588 Fructose-1,6-bisphosphate aldolase; Psort location: Cytoplasmic, score: 8.87.
     
  0.650
MtnA
eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: fnu:FN1413 9.4e-120 methylthioribose-1-phosphate isomerase K08963; COG: COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family; Psort location: Cytoplasmic, score: 8.87; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
  
 0.648
xylB-4
Putative xylulokinase; KEGG: cac:CAC2612 6.8e-94 xylB; xylulose kinase K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.608
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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