Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
etfA-3Electron transfer flavoprotein FAD-binding domain protein; KEGG: ctc:CTC01387 7.1e-16 acyl-coA dehydrogenase K00248; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score: 8.87. (337 aa)    
Predicted Functional Partners:
carD_1
COG: COG2086 Electron transfer flavoprotein, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 0.999
EDS06163.1
FAD binding domain protein; KEGG: plt:Plut_0570 1.6e-39 D-lactate dehydrogenase (cytochrome) K00102; COG: COG0277 FAD/FMN-containing dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
 
 0.994
carD_2
COG: COG2086 Electron transfer flavoprotein, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 0.993
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.981
EtfB
COG: COG2086 Electron transfer flavoprotein, beta subunit; Psort location: Cytoplasmic, score: 8.87.
 
 0.981
pyk-2
Pyruvate kinase; KEGG: tte:TTE1815 8.7e-133 pykF; pyruvate kinase K00873; COG: COG0469 Pyruvate kinase; Psort location: Cytoplasmic, score: 8.87.
  
 0.945
EDS07667.1
Metallo-beta-lactamase domain protein; KEGG: ctc:CTC02196 7.7e-38 hydroxyacylglutathione hydrolase K01069; COG: COG0491 Zn-dependent hydrolases, including glyoxylases; Psort location: Cytoplasmic, score: 8.87.
 
  0.920
pyk
Pyruvate kinase; KEGG: tte:TTE1815 1.2e-137 pykF; pyruvate kinase K00873; COG: COG0469 Pyruvate kinase; Psort location: Cytoplasmic, score: 8.87.
  
 0.919
gcdB
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
    
  0.910
pflB
KEGG: bce:BC0491 6.8e-268 formate acetyltransferase K00656; COG: COG1882 Pyruvate-formate lyase; Psort location: Cytoplasmic, score: 9.98.
     
 0.908
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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