Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lsrKCarbohydrate kinase, FGGY family protein; KEGG: abo:ABO_1407 2.8e-56 sugar kinase, putative K00924; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.87. (476 aa)    
Predicted Functional Partners:
EDS06160.1
FAD binding domain protein; KEGG: eci:UTI89_C3136 9.0e-163 hypothetical protein K00803; COG: COG0277 FAD/FMN-containing dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.873
KduD_2
Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: ecs:ECs3630 1.5e-89 putative oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score: 9.98.
 
     0.799
surE
KEGG: mth:MTH1435 4.0e-34 surE; acid phosphatase K03787; COG: COG0496 Predicted acid phosphatase; Psort location: Cytoplasmic, score: 8.87.
       0.773
EDS06174.1
4Fe-4S binding domain protein; KEGG: mma:MM1824 0.00011 formylmethanofuran dehydrogenase K00205; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score: 8.87.
       0.773
hypA_1
Hydrogenase expression/synthesis hypA family; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
       0.746
betL
BCCT family transporter; KEGG: shn:Shewana3_2719 1.5e-50 choline/carnitine/betaine transporter K01718; COG: COG1292 Choline-glycine betaine transporter; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.721
glpP
COG: COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding); Psort location: Cytoplasmic, score: 8.87.
 
     0.695
EDS06163.1
FAD binding domain protein; KEGG: plt:Plut_0570 1.6e-39 D-lactate dehydrogenase (cytochrome) K00102; COG: COG0277 FAD/FMN-containing dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.674
EDS06169.1
Hypothetical protein; COG: COG1578 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87.
       0.642
EDS06170.1
Hypothetical protein.
       0.642
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.