Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS06115.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (222 aa)    
Predicted Functional Partners:
EDS08627.1
Hypothetical protein.
 
     0.762
EDS06120.1
Recombinase; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs; Psort location: Cytoplasmic, score: 8.87.
 
     0.558
DnaG_2
Hypothetical protein; KEGG: mmy:MSC_0465 0.0027 dnaG; DNA primase K02316.
 
    0.521
EDS07025.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.500
EDS08820.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.442
EDS06114.1
Hypothetical protein.
       0.433
recQ
KEGG: cpf:CPF_0327 4.3e-140 recQ; ATP-dependent DNA helicase RecQ K03654; COG: COG0514 Superfamily II DNA helicase; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.425
EDS06116.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.400
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.