Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS06122.1Hypothetical protein; COG: NOG23666 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (138 aa)    
Predicted Functional Partners:
EDS06123.1
Hypothetical protein; COG: NOG19109 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.861
EDS06036.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
 
   
 0.679
EDS06121.1
Methyltransferase domain protein; KEGG: plt:Plut_1697 1.2e-11 ubiquinone/menaquinone biosynthesis methyltransferase K03183; COG: COG0500 SAM-dependent methyltransferases.
 
     0.668
MshD
Acetyltransferase, GNAT family; KEGG: mka:MK0549 3.2e-07 acetyltransferase K03789; COG: NOG36299 non supervised orthologous group.
 
     0.591
EDS08066.1
Hypothetical protein; COG: NOG14690 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.586
EDS05309.1
Hypothetical protein; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 8.87.
 
    0.555
EDS05267.1
Pyridoxamine 5'-phosphate oxidase family protein; COG: COG3871 Uncharacterized stress protein (general stress protein 26).
 
     0.548
EDS05924.1
Hypothetical protein; COG: COG0730 Predicted permeases; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.509
EDS04884.1
Hypothetical protein; KEGG: ava:Ava_3821 0.00013 manganese containing catalase K07217; COG: COG1633 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the Dps family.
  
     0.508
EDS07212.1
Hypothetical protein; COG: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
     0.496
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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