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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS06123.1Hypothetical protein; COG: NOG19109 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (140 aa)    
Predicted Functional Partners:
EDS06122.1
Hypothetical protein; COG: NOG23666 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
    0.861
EDS06121.1
Methyltransferase domain protein; KEGG: plt:Plut_1697 1.2e-11 ubiquinone/menaquinone biosynthesis methyltransferase K03183; COG: COG0500 SAM-dependent methyltransferases.
       0.577
MshD
Acetyltransferase, GNAT family; KEGG: mka:MK0549 3.2e-07 acetyltransferase K03789; COG: NOG36299 non supervised orthologous group.
  
     0.523
EDS05267.1
Pyridoxamine 5'-phosphate oxidase family protein; COG: COG3871 Uncharacterized stress protein (general stress protein 26).
  
     0.459
mprA_2
Transcriptional regulator, MarR family; COG: NOG36306 non supervised orthologous group.
  
  
 0.448
EDS06263.1
Hypothetical protein.
  
     0.435
EDS05881.1
Hypothetical protein; COG: NOG19109 non supervised orthologous group.
  
     0.426
EDS06266.1
Hypothetical protein; COG: COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
  
     0.424
EDS04858.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.424
EDS05309.1
Hypothetical protein; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 8.87.
  
     0.405
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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