Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS06079.1Hypothetical protein; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87. (236 aa)    
Predicted Functional Partners:
EDS06080.1
Hypothetical protein; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
     0.961
EDS06500.1
IS66 family element, Orf2 protein; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
 
     0.691
EDS08624.1
IS66 family element, Orf2 protein; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
 
     0.690
EDS05194.1
IS66 family element, transposase; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.665
EDS05646.1
IS66 family element, transposase; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.640
EDS05645.1
IS66 family element, Orf2 protein; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
 
     0.618
EDS06078.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.540
EDS06077.1
Hypothetical protein; COG: COG3655 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
       0.532
EDS05684.1
Hypothetical protein; KEGG: rpd:RPD_2368 0.0022 5-oxoprolinase (ATP-hydrolyzing) K01469; COG: COG1653 ABC-type sugar transport system, periplasmic component.
  
     0.464
EDS06499.1
Hypothetical protein.
 
     0.423
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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