Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
cofCGlycosyltransferase, group 2 family protein; KEGG: sat:SYN_00376 5.1e-20 glycosyltransferase involved in cell wall biogenesis; COG: NOG10066 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (445 aa)    
Predicted Functional Partners:
EDS06092.1
Phosphotransferase enzyme family; KEGG: ehi:1.t00095 0.0058 choline/ethanolamine kinase, putative K00894; COG: NOG22933 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
     0.956
ydjZ_1
SNARE-like domain protein; KEGG: pat:Patl_0395 1.8e-17 pyridine nucleotide-disulphide oxidoreductase dimerisation region K00520; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.948
EDS06089.1
Hypothetical protein; KEGG: sat:SYN_00363 1.7e-35 glutamate synthase [NADPH] small chain K00264; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.943
YdjZ_2
SNARE-like domain protein; KEGG: hch:HCH_01003 6.6e-14 probable mercuric reductase K00520; COG: COG0398 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.941
EDS05398.1
Hypothetical protein; KEGG: sat:SYN_00363 2.6e-20 glutamate synthase [NADPH] small chain K00264; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.783
EDS05404.1
Radical SAM domain protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score: 8.87.
 
     0.774
EDS06093.1
Hypothetical protein; COG: COG0535 Predicted Fe-S oxidoreductases; Psort location: Cytoplasmic, score: 8.87.
 
     0.771
dnrC
Methyltransferase domain protein; KEGG: hsa:57412 1.3e-65 AS3MT; arsenic (+3 oxidation state) methyltransferase K07755; COG: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; Psort location: Cytoplasmic, score: 8.87.
 
    0.614
ahpD_1
Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.588
WcaJ
KEGG: tcx:Tcr_1675 1.8e-70 undecaprenyl-phosphate galactosephosphotransferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.581
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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