Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS05977.1Hypothetical protein; COG: NOG13858 non supervised orthologous group. (203 aa)    
Predicted Functional Partners:
EDS06278.1
COG: COG1272 Predicted membrane protein, hemolysin III homolog; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.681
EDS05975.1
4Fe-4S binding domain protein; KEGG: mka:MK0323 7.1e-08 fwd_F2; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00199; COG: NOG11133 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.578
EDS05976.1
Hypothetical protein.
       0.539
EDS06920.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.510
EDS05974.1
Hypothetical protein.
       0.493
EDS05745.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.451
divIB
Hypothetical protein; COG: COG1589 Cell division septal protein; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.403
EDS04936.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.