Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS05982.1NMT1/THI5-like protein; COG: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (348 aa)    
Predicted Functional Partners:
ssuC_3
KEGG: rha:RHA1_ro08170 1.2e-18 ABC transporter, permease component; COG: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.896
fbpC
KEGG: reh:H16_A2382 1.1e-45 ABC-type transporter, ATPase component: NitT family; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.894
yqfC
Sporulation protein YqfC; COG: NOG13846 non supervised orthologous group.
  
     0.593
spoVAD
Stage V sporulation protein AD; COG: NOG06312 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.75.
  
    0.591
EDS08110.1
Putative stage III sporulation protein AG; COG: NOG11553 non supervised orthologous group.
  
     0.588
tauB
ABC transporter, ATP-binding protein; KEGG: mja:MJ0412 1.4e-47 tauB; putative taurine transport system ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
 0.585
malK
ABC transporter, ATP-binding protein; KEGG: pfo:Pfl_4466 6.8e-23 ABC transporter-like K02052; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.585
ssuB
ABC transporter, ATP-binding protein; KEGG: mja:MJ0412 8.8e-53 tauB; putative taurine transport system ATP-binding protein K02049; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.585
SpoIIIAE
Putative stage III sporulation protein AE; COG: NOG06161 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.583
EDS05981.1
Hypothetical protein.
  
    0.578
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.