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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mobA_3Selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: hma:pNG7236 2.8e-14 glmU; UDP-N-acetylglucosamine pyrophosphorylase K00972; COG: COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; Psort location: Cytoplasmic, score: 8.87. (456 aa)    
Predicted Functional Partners:
pucD
Selenium-dependent molybdenum hydroxylase 1; KEGG: rde:RD1_1533 8.1e-98 mop; aldehyde oxidoreductase, putative K00157; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 0.960
yqeC
Putative selenium-dependent hydroxylase accessory protein YqeC; COG: NOG13189 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.957
EDS08353.1
Hypothetical protein; COG: COG0822 NifU homolog involved in Fe-S cluster formation; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.904
nifU
Fe-S iron-sulfur cluster assembly protein, NifU family; KEGG: rxy:Rxyl_1354 1.2e-21 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566; COG: COG0822 NifU homolog involved in Fe-S cluster formation; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.904
PucA
KEGG: aci:ACIAD2466 2.7e-18 putative xanthine dehydrogenase protein; putative xanthine dehydrogenase accessory factor (XdhC) K00087; COG: COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; Psort location: Cytoplasmic, score: 8.87.
   
 0.901
EDS08283.1
Endonuclease/exonuclease/phosphatase family protein; COG: NOG13853 non supervised orthologous group.
    
   0.828
sfrB_2
Putative selenate reductase, YgfK subunit; KEGG: eci:UTI89_C3263 4.3e-195 ygfK; hypothetical protein YgfK K05299; COG: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; Psort location: Cytoplasmic, score: 9.98.
 
     0.828
hydA
Dihydropyrimidinase; KEGG: efa:EF2580 1.4e-111 D-hydantoinase K01464; COG: COG0044 Dihydroorotase and related cyclic amidohydrolases; Psort location: Cytoplasmic, score: 8.87.
 
     0.813
EDS06002.1
Putative selenium metabolism protein SsnA; KEGG: eci:UTI89_C3264 4.0e-57 SsnA protein K01564; COG: COG0402 Cytosine deaminase and related metal-dependent hydrolases; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.810
EDS06715.1
SufB/sufD domain protein; COG: COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.809
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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