Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
xdhAKEGG: mta:Moth_1960 4.8e-203 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K00087; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: Cytoplasmic, score: 8.87. (767 aa)    
Predicted Functional Partners:
cdhC
2Fe-2S iron-sulfur cluster-binding domain protein; KEGG: aha:AHA_2179 4.7e-38 carbon monoxide dehydrogenase small chain K00190; COG: COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs; Psort location: Cytoplasmic, score: 8.87.
 0.999
ndhF
KEGG: mta:Moth_1959 1.1e-70 molybdopterin dehydrogenase, FAD-binding K00087; COG: COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs; Psort location: Cytoplasmic, score: 8.87.
 0.999
guaD
Putative guanine deaminase; KEGG: cac:CAC0282 1.1e-104 cytosine/guanine deaminase related protein K01487; COG: COG0402 Cytosine deaminase and related metal-dependent hydrolases; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.986
ade
Adenine deaminase; KEGG: cac:CAC0887 4.4e-122 adeC; adenine deaminase K01486; COG: COG1001 Adenine deaminase; Psort location: Cytoplasmic, score: 8.87; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
  
  0.917
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
    
 0.909
yfiH
Conserved hypothetical protein, YfiH family; COG: COG1496 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the multicopper oxidase YfiH/RL5 family.
    
  0.903
adeC_1
Putative adenine deaminase; KEGG: cpe:CPE1268 8.7e-133 adeC; probable adenine deaminase K01486; COG: COG1001 Adenine deaminase; Psort location: Cytoplasmic, score: 8.87; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
    
  0.903
deoD
KEGG: bcl:ABC4021 1.3e-76 deoD; purine-nucleoside phosphorylase K03784; COG: COG0813 Purine-nucleoside phosphorylase; Psort location: Cytoplasmic, score: 8.87.
     
  0.900
hpt
KEGG: tte:TTE2394 2.0e-53 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760; COG: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.98; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.900
PucA
KEGG: aci:ACIAD2466 2.7e-18 putative xanthine dehydrogenase protein; putative xanthine dehydrogenase accessory factor (XdhC) K00087; COG: COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.832
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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