Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS05872.1Hypothetical protein; COG: NOG21901 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (214 aa)    
Predicted Functional Partners:
EDS05871.1
Hypothetical protein; COG: NOG13187 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.955
Smc_1
Hypothetical protein; KEGG: gga:374182 2.2e-09 ROCK2; Rho-associated, coiled-coil containing protein kinase 2 K04514; COG: COG4913 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
     0.915
EDS05874.1
Hypothetical protein; COG: NOG13188 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.829
EDS05342.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.694
EDS06915.1
Hypothetical protein; KEGG: ppr:PBPRA2674 0.0079 galU; putative UTP-glucose-1-phosphateuridylyltransferase, galU K00963.
  
     0.600
EDS06126.1
Hypothetical protein; KEGG: ppr:PBPRA2674 0.0079 galU; putative UTP-glucose-1-phosphateuridylyltransferase, galU K00963.
  
     0.600
EDS08589.1
Hypothetical protein.
  
     0.582
EDS05862.1
Hypothetical protein.
  
     0.582
spmB
Transporter gate domain protein; COG: COG0700 Uncharacterized membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.565
AtpE_2
Hypothetical protein; KEGG: afu:AF1163 1.3e-07 atpE; H+-transporting ATP synthase, subunit E K02121; COG: COG1390 Archaeal/vacuolar-type H+-ATPase subunit E; Psort location: Cytoplasmic, score: 8.87.
  
     0.478
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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