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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05882.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (122 aa)    
Predicted Functional Partners:
EDS05883.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.678
EDS05881.1
Hypothetical protein; COG: NOG19109 non supervised orthologous group.
 
     0.597
YafP
KEGG: btk:BT9727_3474 1.1e-08 acetyltransferase, GNAT family K03830; COG: NOG36134 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.558
EDS06499.1
Hypothetical protein.
  
    0.454
EDS08625.1
Hypothetical protein.
  
    0.452
EDS06841.1
Hypothetical protein; COG: NOG23393 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.446
EDS06774.1
SnoaL-like polyketide cyclase; COG: COG5485 Predicted ester cyclase; Psort location: Cytoplasmic, score: 8.87.
  
     0.431
EDS05694.1
COG: COG4905 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.429
EDS06755.1
Site-specific recombinase, phage integrase family; COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.87; Belongs to the 'phage' integrase family.
  
     0.426
EDS08047.1
Hypothetical protein; KEGG: nph:NP1018A 6.8e-07 atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) K02121; Psort location: Cytoplasmic, score: 8.87.
  
     0.421
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.