Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS05688.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
cfa
KEGG: cpr:CPR_1123 5.4e-101 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574; COG: COG2230 Cyclopropane fatty acid synthase and related methyltransferases; Psort location: Cytoplasmic, score: 9.98.
       0.453
dacB_2
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: bcl:ABC1175 6.0e-47 D-alanyl-D-alanine carboxypeptidase K01286; COG: COG1686 D-alanyl-D-alanine carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.87; Belongs to the peptidase S11 family.
       0.412
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.