STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05719.1Hypothetical protein; COG: NOG13513 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.97. (304 aa)    
Predicted Functional Partners:
EDS05303.1
Chorismate mutase; KEGG: stc:str1181 3.6e-08 aroH; chorismate mutase K04516; COG: COG1605 Chorismate mutase; Psort location: Cytoplasmic, score: 8.87.
  
     0.718
EDS05718.1
Hypothetical protein.
       0.675
EDS08645.1
Phage minor structural protein, N-terminal domain protein; COG: COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase); Psort location: Cytoplasmic, score: 8.87.
  
     0.668
EDS08647.1
Phage tail tape measure protein, TP901 family; KEGG: eci:UTI89_C5128 0.0022 putative tail length tape measure protein precursor K00924; COG: COG5280 Phage-related minor tail protein.
  
     0.651
EDS05154.1
Metallo-beta-lactamase domain protein; KEGG: azo:azo0296 1.3e-09 probable metallo-beta-lactamase superfamily protein; COG: COG0491 Zn-dependent hydrolases, including glyoxylases; Psort location: Cytoplasmic, score: 8.87.
  
     0.617
mshA_2
Glycosyltransferase, group 1 family protein; KEGG: gox:GOX1123 1.6e-25 glycosyltransferase K00754; COG: COG0438 Glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
  
     0.559
mntP_2
Hypothetical protein; Probably functions as a manganese efflux pump.
  
     0.527
EDS08379.1
Hypothetical protein; COG: NOG07813 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.508
EDS08022.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.467
EDS06235.1
KEGG: rru:Rru_A0882 1.8e-63 ABC transporter, transmembrane region K06021; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.464
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.