STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05723.1HNH endonuclease domain protein; KEGG: eco:b1159 1.2e-18 mcrA, rglA, ponA; e14 prophage; restriction of DNA at 5-methylcytosine residues K07451; COG: COG1403 Restriction endonuclease; Psort location: Cytoplasmic, score: 8.87. (277 aa)    
Predicted Functional Partners:
EDS05722.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.609
EDS05724.1
Hypothetical protein; COG: NOG15747 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.431
EDS05721.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.402
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.