STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05841.1Hypothetical protein; COG: NOG18663 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (212 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.876
EDS06089.1
Hypothetical protein; KEGG: sat:SYN_00363 1.7e-35 glutamate synthase [NADPH] small chain K00264; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.779
EDS05398.1
Hypothetical protein; KEGG: sat:SYN_00363 2.6e-20 glutamate synthase [NADPH] small chain K00264; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.779
putR
Hypothetical protein; KEGG: shn:Shewana3_2682 0.0042 transcriptional regulator, CdaR K01694; COG: COG2508 Regulator of polyketide synthase expression; Psort location: Cytoplasmic, score: 8.87.
       0.555
Gph_3
Putative phosphoglycolate phosphatase, bacterial; KEGG: tde:TDE2716 3.7e-47 HAD-superfamily hydrolase, subfamily IA K01091; COG: COG0546 Predicted phosphatases; Psort location: Cytoplasmic, score: 8.87.
 
      0.524
PrpC2
KEGG: lla:L67186 6.4e-137 gltA; citrate synthase K01647; COG: COG0372 Citrate synthase; Psort location: Cytoplasmic, score: 9.98.
   
    0.485
EDS05843.1
Hypothetical protein.
       0.484
AdhE
Aldehyde dehydrogenase (NAD) family protein; KEGG: cpr:CPR_2540 0. aldehyde-alcohol dehydrogenase [includes: alcohol K00001:K04072; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.467
EDS08290.1
ferredoxin--NADP+ reductase, subunit alpha; KEGG: cno:NT01CX_0467 2.1e-108 glutamate synthase, small subunit K00226; COG: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Psort location: Cytoplasmic, score: 9.98.
  
   0.454
pyrK
Oxidoreductase NAD-binding domain protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
   0.454
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.