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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05648.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (111 aa)    
Predicted Functional Partners:
EDS05646.1
IS66 family element, transposase; COG: COG3436 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
 
     0.747
EDS07224.1
Transposase, IS4 family; COG: COG3666 Transposase and inactivated derivatives; Psort location: Cytoplasmic, score: 8.87.
  
     0.682
EDS07883.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.669
EDS06822.1
GBS Bsp-like repeat protein; COG: NOG18564 non supervised orthologous group.
  
     0.491
EDS05647.1
Hypothetical protein.
       0.467
EDS07763.1
Hypothetical protein; COG: NOG27907 non supervised orthologous group.
  
     0.443
flr_1
Flavin reductase-like protein; COG: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; Psort location: Cytoplasmic, score: 8.87.
  
     0.434
CwlC_2
GBS Bsp-like repeat protein; COG: NOG18564 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.405
EDS08047.1
Hypothetical protein; KEGG: nph:NP1018A 6.8e-07 atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) K02121; Psort location: Cytoplasmic, score: 8.87.
  
     0.401
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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