STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05566.1Putative levansucrase; KEGG: bsu:BG10388 8.5e-119 sacB; levansucrase K00692; COG: NOG06344 non supervised orthologous group; Psort location: Extracellular, score: 9.55; Belongs to the glycosyl hydrolase 68 family. (224 aa)    
Predicted Functional Partners:
sacB
Levansucrase; KEGG: bsu:BG10388 1.5e-87 sacB; levansucrase K00692; COG: NOG06344 non supervised orthologous group; Psort location: Extracellular, score: 9.73; Belongs to the glycosyl hydrolase 68 family.
     0.991
EDS05567.1
Hypothetical protein; KEGG: bsu:BG10388 1.0e-12 sacB; levansucrase K00692; COG: NOG06344 non supervised orthologous group; Psort location: Extracellular, score: 9.55.
       0.773
FruA
KEGG: cpr:CPR_0550 3.4e-163 fructose specific permease K00890; COG: COG1299 Phosphotransferase system, fructose-specific IIC component; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.636
EDS05565.1
Hypothetical protein.
       0.484
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.