STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05492.1Fic family protein; COG: COG2184 Protein involved in cell division; Psort location: Cytoplasmic, score: 8.87. (365 aa)    
Predicted Functional Partners:
EDS06380.1
DNA primase small subunit; KEGG: ddi:DDB0214830 0.00013 repB; transcription factor IIH subunit K01529; COG: COG4951 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.503
EDS05484.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.441
EDS05488.1
Hypothetical protein; KEGG: hhe:HH1444 5.8e-19 guaA; guanosine monophosphate synthetase GuaA K01951; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
 
     0.441
tag
KEGG: pha:PSHAa0788 4.5e-42 tag; 3-methyl-adenine DNA glycosylase I K01246; COG: COG2818 3-methyladenine DNA glycosylase; Psort location: Cytoplasmic, score: 8.87.
       0.404
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.