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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDS05514.1Hypothetical protein; KEGG: art:Arth_0051 8.3e-15 inulin fructotransferase (DFA-I-forming). (83 aa)    
Predicted Functional Partners:
EDS05515.1
Hypothetical protein; KEGG: eci:UTI89_C5045 7.9e-06 yjiM; hypothetical protein YjiM K04111.
       0.757
WcaJ
KEGG: tcx:Tcr_1675 1.8e-70 undecaprenyl-phosphate galactosephosphotransferase K03606; COG: COG2148 Sugar transferases involved in lipopolysaccharide synthesis; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.638
trxA
Thioredoxin; KEGG: mbo:Mb3945 4.5e-26 trxC; thioredoxin TrxC (TRX) (MPT46) K03671; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.98; Belongs to the thioredoxin family.
  
 
 0.560
trxA_3
Thioredoxin; KEGG: chy:CHY_0560 6.0e-12 thioredoxin/thioredoxin-disulfide reductase K00384; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 8.87; Belongs to the thioredoxin family.
  
 
 0.560
TrxA_2
Putative thioredoxin; KEGG: eci:UTI89_C4335 9.8e-15 trxA; thioredoxin 1 K03671; COG: COG0526 Thiol-disulfide isomerase and thioredoxins; Psort location: Cytoplasmic, score: 9.98; Belongs to the thioredoxin family.
  
 
 0.560
EDS07256.1
Hypothetical protein; KEGG: lpl:lp_1381 1.0e-26 astA; arylsulfate sulfotransferase K01023; COG: NOG14107 non supervised orthologous group.
  
 
 0.560
glpE
Sortase B cell surface sorting signal; KEGG: cff:CFF8240_0959 0.00014 thiosulfate sulfurtransferase K01010; COG: COG0607 Rhodanese-related sulfurtransferase; Psort location: Cellwall, score: 9.98.
  
 
 0.552
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.535
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.524
hisE
phosphoribosyl-ATP diphosphatase; KEGG: sao:SAOUHSC_03008 3.6e-56 imidazole glycerol phosphate synthase subunit HisF, putative K01663; COG: COG0139 Phosphoribosyl-AMP cyclohydrolase; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the PRA-PH family.
     
 0.498
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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