Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rihBKEGG: efa:EF2587 2.6e-12 inosine-uridine preferring nucleoside hydrolase K01239; COG: COG1957 Inosine-uridine nucleoside N-ribohydrolase; Psort location: Cytoplasmic, score: 8.87. (293 aa)    
Predicted Functional Partners:
EDS05406.1
ABC transporter, solute-binding protein; COG: COG4134 ABC-type uncharacterized transport system, periplasmic component.
 
     0.854
potH
KEGG: ava:Ava_0243 2.1e-08 molybdate ABC transporter, permease protein K02018; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.834
EDS05411.1
Rhodanese-like protein; KEGG: cyb:CYB_2710 1.0e-33 rhdA; thiosulfate sulfurtransferase K01010; COG: COG2897 Rhodanese-related sulfurtransferase; Psort location: Cytoplasmic, score: 8.87.
 
     0.767
phnV
KEGG: ava:Ava_0243 1.3e-08 molybdate ABC transporter, permease protein K02018; COG: COG1177 ABC-type spermidine/putrescine transport system, permease component II; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.763
cysA
ABC transporter, ATP-binding protein; KEGG: sme:SMc01965 3.3e-53 putative spermidine/putrescine transport ATP-binding ABC transporter protein K02052; COG: COG3839 ABC-type sugar transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.760
epsE
Glycosyltransferase, group 2 family protein; KEGG: gbe:GbCGDNIH1_1141 3.9e-35 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.87.
       0.723
EDS05405.1
Oxidoreductase; COG: NOG16874 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.594
EDS06092.1
Phosphotransferase enzyme family; KEGG: ehi:1.t00095 0.0058 choline/ethanolamine kinase, putative K00894; COG: NOG22933 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
 
     0.576
EDS05398.1
Hypothetical protein; KEGG: sat:SYN_00363 2.6e-20 glutamate synthase [NADPH] small chain K00264; COG: COG0247 Fe-S oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
 
     0.544
bioB_1
Radical SAM domain protein; KEGG: aae:aq_975 5.8e-09 bioB; biotin synthetase K01012; COG: COG0502 Biotin synthase and related enzymes; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.536
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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