Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDS04948.1FeoA domain protein; Psort location: Cytoplasmic, score: 8.87. (75 aa)    
Predicted Functional Partners:
feoB-4
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
 0.916
EDS06841.1
Hypothetical protein; COG: NOG23393 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.630
EDS04857.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
  
     0.534
EDS04949.1
Hypothetical protein; KEGG: cal:orf19.3100 0.0042 USO4; coiled-coil protein necessary for protein transport from ER to Golgi K01553; COG: COG4905 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.532
EDS04858.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.496
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.473
feoB-2
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.473
feoB-3
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.473
lytH_1
KEGG: hne:HNE_0633 2.9e-09 peptidase, M23 family; COG: COG0739 Membrane proteins related to metalloendopeptidases; Psort location: Extracellular, score: 8.10.
  
     0.433
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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