Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDS05047.1Hypothetical protein; KEGG: mma:MM3157 1.3e-09 putative 6-aminohexanoate-dimer hydrolase; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins. (107 aa)    
Predicted Functional Partners:
EDS05046.1
Hypothetical protein; KEGG: mma:MM3157 5.0e-15 putative 6-aminohexanoate-dimer hydrolase; COG: COG1680 Beta-lactamase class C and other penicillin binding proteins.
     0.990
hmrR
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 2.5e-06 yhdM; Zn(II)-responsive regulator of ZntA; COG: COG4978 Transcriptional regulator, effector-binding domain/component; Psort location: Cytoplasmic, score: 8.87.
 
    0.648
EDS05309.1
Hypothetical protein; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 8.87.
 
     0.611
lacA
Bacterial transferase hexapeptide repeat protein; KEGG: lpl:lp_0393 2.2e-79 thgA1; galactoside O-acetyltransferase K00633; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score: 9.98.
       0.533
EDS05048.1
Hypothetical protein; COG: NOG08696 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
       0.470
SrfAA
AMP-binding enzyme; KEGG: ava:Ava_1613 5.8e-204 non-ribosomal peptide synthase K00644; COG: COG1020 Non-ribosomal peptide synthetase modules and related proteins; Psort location: Cytoplasmic, score: 9.96; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.464
EDS05267.1
Pyridoxamine 5'-phosphate oxidase family protein; COG: COG3871 Uncharacterized stress protein (general stress protein 26).
  
     0.429
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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