Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lysC_1KEGG: chy:CHY_1909 1.7e-120 aspartate kinase, monofunctional class K00928; COG: COG0527 Aspartokinases; Belongs to the aspartokinase family. (402 aa)    
Predicted Functional Partners:
asd
KEGG: lsl:LSL_0313 7.3e-145 asd; aspartate-semialdehyde dehydrogenase K00133; COG: COG0136 Aspartate-semialdehyde dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.971
hom_1
KEGG: tte:TTE2620 5.9e-79 thrA2; homoserine dehydrogenase K00003; COG: COG0460 Homoserine dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
 
 0.953
yclM
Amino acid kinase family; KEGG: ctc:CTC02356 1.2e-128 aspartate kinase K00928; COG: COG0527 Aspartokinases; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family.
     
 
0.900
hom_2
KEGG: chy:CHY_1912 6.1e-125 hom; homoserine dehydrogenase K00003; COG: COG0460 Homoserine dehydrogenase; Psort location: Cytoplasmic, score: 8.87.
 
 0.895
EDS07585.1
Aminotransferase, class I/II; KEGG: ctc:CTC01294 1.1e-118 aspartate aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase.
 
 0.862
argG
KEGG: chy:CHY_2260 4.7e-134 argG; argininosuccinate synthase K01940; COG: COG0137 Argininosuccinate synthase; Psort location: Cytoplasmic, score: 8.87; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.854
aspC
Aminotransferase, class I/II; KEGG: cac:CAC2832 1.8e-118 PLP-dependent aminotransferase K00811; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.
  
 0.836
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.827
AnsA
glutamyl-tRNA(Gln) amidotransferase subunit D domain protein; KEGG: pho:PH0066 3.7e-13 L-asparaginase K01424; COG: COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Psort location: Cytoplasmic, score: 8.87.
     
 0.817
EDS05086.1
Putative homoserine kinase; KEGG: swo:Swol_1301 4.8e-100 phosphoglycerate mutase K01834; COG: COG3635 Predicted phosphoglycerate mutase, AP superfamily; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.817
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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