Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MelRTranscriptional regulator, AraC family; KEGG: bce:BC3740 8.8e-10 ADA regulatory protein K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 8.87. (302 aa)    
Predicted Functional Partners:
araC_2
KEGG: bcz:BCZK3497 2.2e-10 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
 
   0.765
Btr_2
KEGG: bcz:BCZK3497 1.4e-13 adaA; transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.666
AraC_4
KEGG: bcz:BCZK3497 3.4e-07 adaA; transcriptional regulator, AraC family K00567; COG: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
  
     0.665
AraC_1
Transcriptional regulator, AraC family; KEGG: bli:BL05281 6.9e-14 adaA; methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.65.
 
   0.621
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
       0.567
galT
UTP--hexose-1-phosphate uridylyltransferase; KEGG: cac:CAC2961 1.4e-150 galT; galactose-1-phosphate uridyltransferase K00964; COG: COG4468 Galactose-1-phosphate uridyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
     0.547
rhaS_2
Transcriptional regulator, AraC family; KEGG: bcz:BCZK2914 2.5e-10 adaA; methylphosphotriester-DNA alkyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98; ORF located using Blastx.
  
     0.524
SoxS_2
Transcriptional regulator, AraC family; KEGG: bha:BH0394 3.6e-13 adaA; methylphosphotriester-DNA alkyltransferase (AraC/XylS family) K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score: 9.98.
  
     0.476
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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